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Frontiers in Neuroscience

Frontiers Media SA

Preprints posted in the last 7 days, ranked by how well they match Frontiers in Neuroscience's content profile, based on 223 papers previously published here. The average preprint has a 0.23% match score for this journal, so anything above that is already an above-average fit.

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Sleep physiology in late pregnancy: A video-based, multi-night, in-home, level 3 sleep apnea study of pregnant participants and their bed partners

Kember, A. J.; Ritchie, L.; Zia, H.; Elangainesan, P.; Gilad, N.; Warland, J.; Taati, B.; Dolatabadi, E.; Hobson, S.

2026-04-25 obstetrics and gynecology 10.64898/2026.04.17.26351131 medRxiv
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We completed a video-based, four-night, in-home, level 3 sleep apnea study of healthy, low-risk pregnant participants and their bed partners in order to characterize sleep physiology in the third trimester of pregnancy. Demographic, anthropometric, and baseline sleep health characteristics were recorded, and the NightOwl home sleep apnea test device was used to measure sleep breathing, posture, and architecture parameters. Symptoms of restless legs syndrome were elicited in the exit interview. Forty-one pregnant participants and 36 bed partners completed the study. Bed partners had a significantly higher prevalence of sleep apnea than their pregnant co-sleepers (31% vs. 5.9%). Bed partners also had more severe sleep apnea than their pregnant co-sleepers, and this persisted on an adjusted analysis for baseline differences in factors known to increase risk of sleep apnea. In pregnant participants, increasing gestational age was found to be protective against mild respiratory events but not more severe events. While the correlation between STOP-Bang score and measures of sleep apnea severity was weak, an affirmative response to the witnessed apneas item on the STOP-Bang questionnaire was a strong predictor of more severe sleep apnea for all participants. Smoking history also increased sleep apnea risk. Pregnant participants had lower sleep efficiency and longer self-reported sleep onset latency. Restless legs syndrome was experienced by 39.5% of the pregnant participants but no bed partners. From a sleep breathing perspective, people with healthy, low-risk pregnancies have better sleep than their bed partners despite lower sleep efficiency and higher rates of restless legs syndrome.

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A standardized naturalistic audio stimuli database with unsupervised labeling

Al-Naji, A.; Schubotz, R. I.; Zahedi, A.

2026-04-21 neuroscience 10.64898/2026.04.16.718910 medRxiv
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Research in cognitive neuroscience has relied on simple, highly controlled stimuli due to the difficulty in developing standardized, ecologically valid stimulus sets. However, there is a consensus that using ecologically valid stimuli is imperative to generalize results beyond controlled laboratory settings. The current study introduces a naturalistic audio stimulus database, consisting of short, recognizable, and emotionally rated stimuli. To create such a database, the current study collected 291 audio files from a wide range of sources. 361 participants rated the audio clips on emotionality, arousal, and recognizability, and subsequently freely described the audios by typing what they believed the sound to be. The text responses of the participants were embedded and clustered using an unsupervised machine-learning algorithm to derive a participant-grounded organization of auditory object categories. The results indicate audio clips were easily recognizable, while emotionality and arousal ratings showed broad variability, making the database suitable for diverse experimental needs. Furthermore, the final database comprises 10 distinct semantic categories, providing a diverse set of auditory stimuli.

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Repolarisation Speed May Vary with Characteristic Frequency in Human Spiral Ganglion Cells: Preliminary Observation from Electrically Evoked Compound Action Potentials

Lien, J. T.-H.; Strahl, S.; Garcia, C.; Vickers, D.

2026-04-24 otolaryngology 10.64898/2026.04.23.26351590 medRxiv
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The human auditory system decomposes complex sounds into distinct components via a collection of processing steps. Knowing whether Spiral Ganglion Cells (SGCs) play an active role in the decoding of complex sounds can facilitate the development of Cochlear Implant (CI) coding strategies and clinical assessment tools. Early animal studies reported SGCs being similar across different characteristic frequencies (CFs). In this study, human electrically evoked compound action potentials (eCAPs) were analysed to probe the relationship between the reciprocal of CF and the duration of the eCAP. A significant relationship could indicate that SGCs may not simply be passive cables. eCAP datasets from 6 published studies (175 CI users, 1243 recordings) were analysed and their peaks were automatically labelled. The n1p2 latency was derived for each recording as a proxy of the action potential duration. The CF of each recording was estimated by mapping the average insertion angle of the electrode to the human SGC map. A weak but statistically significant relationship was observed between the n1p2 latency and the reciprocal of CF (random-effects model with random intercepts for subject, r = 0.09, p = 0.024, n= 450) supporting the hypothesis that lower CF is associated with slower repolarisation (longer n1p2 latency) in human spiral ganglion cells.

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Development and clinical application of a consonant confusion task to evaluate hearing aid benefit

Hajicek, J.; Harris, S. E.; Neely, S. T.

2026-04-24 otolaryngology 10.64898/2026.04.23.26351598 medRxiv
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Purpose: This research sought to develop a low-cognitive-load speech-in-noise test based on consonant confusions with the potential for assessing hearing-aid benefit. Methods: Vowel-consonant-vowel (VCV) stimuli with added speech-shaped noise were presented as a closed-set consonant identification task. Initially, consonant-confusion matrices were used to select, from a larger set of consonants and vowel contexts, a set of ten consonants and associated signal-to-noise ratios (SNR) that were sensitive to hearing loss. The sensitivity of the qVCV test to hearing loss was validated by comparing predicted pure-tone average (PTA) hearing thresholds with their audiometric PTA. Clinical viability of the qVCV test was assessed by comparisons to the QuickSIN test. Hearing-aid benefit was assessed by comparing test scores in unaided and aided conditions. Results: The consonants most sensitive to hearing loss were /b d g t k v z s [esh] n/ in the vowel context /[a]/. A cross-validated prediction of PTA had a mean-absolute error of 5.7 dB. The repeatability of qVCV at 50 trials was equivalent to the QuickSIN average of two lists. Hearing-aid benefit was quantified as a decibel reduction in hearing loss. Conclusions: qVCV and QuickSIN performed similarly when test times are equated. The advantages of qVCV include lower cognitive demand, fewer learning eeects, and automated scoring. PTA predicted by qVCV which greatly exceeds audiometric PTA may indicate either cognitive deficits or cochlear neural degeneration. The qVCV quantification of hearing-aid benefit may have clinical value

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Lateral hypothalamic melanin-concentrating hormone neuron dynamics in rats during sensory stimulation and sugar sweetened alcoholic cocktail drinking

Kuebler, I. R. K.; Vollan, J. D.; Chin, J. Y.; Suarez, M.; Bass, C. E.; Hubbard, N. A.; Wakabayashi, K. T.

2026-04-21 neuroscience 10.64898/2026.04.17.719280 medRxiv
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There is a dearth of information on how different cocktails sweetened with different sugars impact brain activity. Glucose enters the brain faster and in greater concentration than fructose and directly affects neuronal activity of melanin-concentrating hormone (MCH) neurons. MCH signaling promotes both glucose drinking and alcohol intake by integrating central and sensory inputs, but it is currently unknown how MCH neuronal activity relates to sweetened cocktail drinking. This study sought to investigate the relationship between MCH activity and sugar-sweetened alcoholic cocktail drinking. We also sought to compare MCH neuronal responses to the sugar solutions without alcohol as well as their response to sensory stimuli. In female and male rats, we used fiber photometry to monitor MCH neurons in response to sensory stimuli and during drinking of 10% glucose, 10% fructose, and glucose or fructose cocktails with 1.25% or 10% alcohol. We found that MCH activity rises in response to a variety of sensory stimuli and peaks before the start of drinking for all cocktails, before returning to baseline near the start of drinking. The cocktail type impacted the dynamics of MCH activity, where increased alcohol concentration resulted in earlier MCH activity for fructose but not glucose cocktails. Finally, we found that peak MCH activity during drinking is correlated with approach behavior for all sugar and cocktail types. These findings suggest that glucose and alcohol may interact to directly influence MCH activity. Further, MCH neurons may regulate cocktail drinking in response to sugar type and alcohol concentration. O_FIG O_LINKSMALLFIG WIDTH=200 HEIGHT=118 SRC="FIGDIR/small/719280v1_ufig1.gif" ALT="Figure 1"> View larger version (17K): org.highwire.dtl.DTLVardef@b992c3org.highwire.dtl.DTLVardef@1526895org.highwire.dtl.DTLVardef@1504c6dorg.highwire.dtl.DTLVardef@c990fc_HPS_FORMAT_FIGEXP M_FIG C_FIG New and noteworthyFiber photometry was used to monitor lateral hypothalamic melanin-concentrating hormone (MCH) neurons in male and female rats during sensory stimuli and drinking of glucose, fructose, or glucose- or fructose-sweetened alcoholic cocktails. Subsecond-scale changes in MCH activity occurred after stimuli. Peak MCH activity during drinking was correlated with approach behavior. Alcohol concentration only impacted MCH activity with fructose cocktails. We discuss the implications of MCH dynamics towards brain function, associative learning, and alcohol use disorder.

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Temporary deterioration of health and behavior during pexidartinib-mediated microglia depletion and repopulation in progranulin-deficient mice

Weyer, M.-P.; Hahnefeld, L.; Franck, L.; Schreiber, Y.; Angioni, C.; Schaefer, M. K. E.; Tegeder, I.

2026-04-21 neuroscience 10.64898/2026.04.20.719642 medRxiv
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Progranulin (PGRN) is a neurotrophic and anti-inflammatory factor produced mainly by neurons and microglia in the central nervous system. Progranulin haploinsufficiency causes frontotemporal dementia (FTD). In a previous study we showed that transgenic restoration of progranulin in neurons in progranulin knockout mice (NestinGrn KOBG knockout background) did not prevent the dementia-like phenotype. Here, we assessed if pharmacologic microglia depletion via PLX3397-diet (CSF1R-antagonist) had therapeutic value in these mice. Microglia depletion and spontaneous repopulation was confirmed in immunofluorescence and rtPCR studies. There was no difference in depletion or repopulation efficiency between NesGrn KOBG, PGRN KO and heterozygous (het) PGRN mice, but microglia repopulated faster than in control Grn-flfl mice, and the morphology of primary PGRN deficient microglia during repopulation was closer to homeostatic microglia, and it was accompanied by a remarkable restoration of dendritic spines and synaptic structures. Regardless of these positive effects, NesGrn KOBG and PGRN het mice experienced serious side effects during microglia depletion which peaked around the microglia nadir. Overactivity and excessive grooming escalated and caused serious skin lesions. Bulk transcriptomic and metabolomic studies in the brain taken 8 weeks after the end of PLX-diet clearly revealed differences between genotypes but mostly no lasting impact of PLX-diet, except for a further increase of proinflammatory genes, cathepsins and complement factors in PLX-treated groups. Cell type specific lipidomic studies revealed a time dependent switch not only in microglia but also astrocytes upon PLX3397 treatment. While nadir-microglia were triglyceride-laden, repopulated microglia returned to normal TG levels but were enriched in ether-bound phosphatidylcholines (PC-O) and lysophosphatidylglycerol species which are pro-inflammatory lipids; and astrocytes overtook the TG burden during repopulation. Our data suggest that microglia depletion may cause a deterioration in progranulin-deficiency.

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Direct Assessment of Short-Latency Intracortical Inhibition via Immediate TMS-Evoked Potentials

Christiansen, L.; Song, Y.; Haagerup, D.; Beck, M. M.; Montemagno, K. T.; Rothwell, J.; Siebner, H. R.

2026-04-20 neuroscience 10.64898/2026.04.15.718740 medRxiv
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Short-interval intracortical inhibition (SICI) is the most widely used neurophysiological index of GABAergic inhibition in the human cortex. However, it is an indirect measure, inferring synaptic inhibition from suppression of peripherally recorded motor-evoked potentials (MEPs) elicited by transcranial magnetic stimulation (TMS). In the standard protocol, a subthreshold conditioning pulse suppresses the MEP evoked by a suprathreshold test pulse delivered 1-5 ms later. Interpretation is further complicated by temporal overlap with short-interval intracortical facilitation (SICF), reflecting excitatory interactions at interstimulus intervals of [~]1.5 and 2.7 ms. To overcome these limitations, we recorded immediate TMS-evoked EEG potentials (iTEPs; 1-10 ms post-stimulus) as a more direct measure of motor cortical activity in 16 healthy volunteers (20-35 years; 7 male). The conventional SICI protocol suppressed only later components of the iTEP, likely corresponding to late corticospinal volleys previously identified in epidural spinal recordings after suprathreshold TMS, while the earliest iTEP component was unaffected. Importantly, later iTEPs were suppressed to a similar extent whether conditioning-test intervals coincided with SICF peaks or troughs, and the magnitude of iTEP suppression correlated with concurrently recorded paired-pulse MEP suppression. SICI also reduced an early TEP component (N15; 10-20 ms), but paired-pulse N15 suppression showed a different dependence on stimulus intensity and did not correlate with MEP suppression. These findings demonstrate that SICI measured via MEPs does not reflect a global index of cortical GABAergic motor cortical inhibition but instead reflects inhibition within specific cortical circuits that can be investigated directly with iTEPs.

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Hierarchical Semi-Markov Smooth Models of Latent Neural States

Krause, J.; van Rij, J.; Borst, J. P.

2026-04-20 neuroscience 10.64898/2025.12.25.696483 medRxiv
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Hidden (semi-) Markov Models (HsMMs) are increasingly being used to segment neurophysiological signals into sequences of latent cognitive processes. The idea: different processes will leave distinct traces in trial-level recordings of (multivariate) neuro-physiological signals. Markov models, equipped with an emission model of these traces and a latent process model describing the progression through the different latent processes involved in a task, can then be used to infer the most likely process for any time-point and trial. However, the currently used HsMMs remain limited in two important ways. First, they cannot account for subject-level heterogeneity in the latent and emission process. Instead, a single group-level model is assumed to explain the entire data. Second, they cannot account for the potentially non-linear effects of experimental covariates on the latent and emission process. To address these problems, we present a modeling framework in which the HsMM parameters of the emission and latent process are replaced with mixed additive models, including smooth functions of experimental covariates and random effects. We derive all necessary quantities for empirical Bayes and fully Bayesian inference for all parameters and provide a Python implementation of all estimation algorithms. To demonstrate the advantages offered by this framework, we apply such a multi-level model to an existing lexical decision dataset. We show that, even in such a simple task, not all subjects rely on the same processes equally and that at least two semi-Markov states, previously believed to reflect distinct processes, might actually relate to the same cognitive process.

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EEG responses to auditory stimuli are less context-dependent in preschoolers with autism spectrum disorder compared to typical development

Shao, M.; McNair, K. A.; Parra, G.; Tam, C.; Sullivan, N.; Senturk, D.; Gavornik, J. P.; Levin, A. R.

2026-04-25 neurology 10.64898/2026.04.17.26350631 medRxiv
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Individuals with autism spectrum disorder (ASD) often exhibit atypical auditory processing, yet it remains unclear whether and how the integration of simple acoustic features and contextual information is impacted in ASD. One real-world example of this integration is the auditory looming bias, the prioritized processing and perception of approaching auditory stimuli. We designed a paradigm that presents intensity-rising (looming) and intensity-falling (receding) auditory stimuli to 3-4-year-old children with ASD (n = 21), children with sensory processing concerns who do not have ASD (SPC; n = 16) and children with typical development (TD; n = 30). We recorded neural responses using electroencephalography (EEG) and found evidence of looming bias in the SPC and TD groups, as indexed by greater P1 peak amplitude during the looming than receding stimuli (TD: t(64) = 6.87, p < .001; SPC: t(64) = 4.07, p < .001). But this finding was not present in the ASD group (p = .194). Additionally, the ASD group showed reduced differentiation between looming and receding stimuli, as indicated by significantly lower Rise-Fall Difference Score (RFDS) in comparison to the TD group (Z = -3.00, padj = .008). These findings suggested altered context-dependent modulation of sensory input in ASD.

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Trans-Aqueduct Access to the Third Ventricle for Delivery of Medical Devices: A Feasibility Study

Haines, M. H.; Ronayne, S. M.; Pickles, K.; Begg, D. A.; Hurley, P. J.; Ferraccioli, M.; Desmond, P.; Opie, N. L.

2026-04-21 neurology 10.64898/2026.04.14.26348906 medRxiv
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This research demonstrates that the trans-aqueduct approach is a feasible, minimally invasive access pathway to the third ventricle, offering a potential route to the deep brain for therapeutic technologies. Further pre-clinical investigation is required to thoroughly evaluate physiological tolerance, trauma risk, and the long-term implications of intraventricular implantation. The third ventricle is a high-value site for neuromodulation due to its proximity to deep-brain targets, including the subthalamic nucleus (STN) and globus pallidus internus (GPi). This study defined the anatomical pathway; and evaluated the technical feasibility of retrograde access to the third ventricle via the cerebral aqueduct using minimally invasive interventional techniques. Evaluation was conducted in three phases using human MRI datasets (n=16; mean age 48.4 years) and cadaveric specimens (n=6; mean age 88.2 years). Phase 1 involved morphometric MRI analysis of the aqueduct and ventricles. Phase 2 tested trans-aqueduct access on cadaver specimens via fluoroscopically guided guidewires and catheters. Phase 3 utilized direct anatomical dissections on cadaver specimens (n=3) to morphometrically measure the third ventricular cavity and its relationship to deep-brain nuclei. Measurements across the sample groups showed a mean aqueduct diameter of 1.6 mm (SD=0.14). Third ventricle dimensions averaged 27.6 mm (ventral-dorsal), 19.9 mm (caudal-cranial), and 5.7 mm (lateral). Successful access to the third ventricle was achieved in 83% (5/6) of cadaveric specimens. The optimal technical configuration utilized a 0.018'' angled-tip guidewire and 5-6 Fr catheters; the aqueduct accommodated diameters up to 2.0 mm with minimal resistance. The STN and GPi were localized within 5-20 mm of the ventricular volumetric centroid. The trans-aqueduct approach is a technically feasible, minimally invasive pathway for accessing the third ventricle. This route offers a potential alternative for the delivery of therapeutic neurotechnologies. Further research is required to assess physiological tolerance, trauma risk, and the long-term safety of intraventricular implantation.

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Brain-heart interactions predict brain activity recovery after systemic anoxia

Candia-Rivera, D.; Carrion-Falgarona, S.; Chavez, M.; de Vico Fallani, F.; Charpier, S.; Mahon, S.

2026-04-21 neuroscience 10.64898/2026.04.17.719210 medRxiv
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BackgroundGlobal cerebral anoxia is a leading cause of death and resuscitated patients often remained persistently affected by neurological deficits. While previous studies suggest that brain-heart electrophysiological interactions may predict severity and prognosis after hypoxic brain injury coma, little is known about the brain-heart dynamics at near-death. Gaining insight into these mechanisms is crucial for developing targeted interventions in critical conditions. ResultsUsing a rodent model of reversible systemic anoxia (n=29, male and female rats), we investigated whether brain-heart interactions during the asphyxia onset could predict the return of brain electrical activities after resuscitation. Electrophysiological recordings confirmed that cerebral activity declines following asphyxia, coinciding with increased heart rate variability. Notably, the strong coupling between cardiac parasympathetic activity and high-frequency brain activity in the somatosensory cortex and hippocampus serves as a key predictor of a favorable outcome. ConclusionOur study underscores the involvement of the brain-heart axis mechanisms in the physiology of dying and the potential prognostic significance of these mechanisms, paving the way for translational research into critical care, based on new characterizations of cardiac reflexes and brain-heart interactions.

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The impact of cognitive processes associated with image recognition on visuo-vestibular interaction

Malara, P.; Tosin, A. G.; Castellucci, A.; Martellucci, S.; Musumano, L. B.; Mandala, M.

2026-04-23 otolaryngology 10.64898/2026.04.22.26351361 medRxiv
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An increasing number of studies highlight the role of saccadic remodulation in compensatory mechanisms following vestibular injury, and the reappearance of SHIMP saccades correlates with symptom improvement measured by the Dizziness Handicap Inventory (DHI). To investigate the influence of attentional processes and working memory on visuo-vestibular interaction, three independent but interrelated experiments were conducted. In the first two experiments, healthy subjects and patients with unilateral or bilateral vestibular deficits underwent vHIT in SHIMP mode and the Functional Head Impulse Test (fHIT), performed first separately and subsequently simultaneously. Mean latency and clustering of SHIMP saccades, together with Landolt C recognition rates, were analyzed. Differences between separate and combined protocols were assessed, and, in patients, correlated with symptom severity measured by the DHI, to determine whether the near-simultaneous execution of tasks mediated by shared parietal cortical substrates influenced performance. In the third experiment, vHIT in HIMP mode and fHIT were performed using separate and combined protocols to evaluate whether recognition-related cognitive load affected recovery saccade latency and clustering. Results suggest that visual recognition modulates visuo-vestibular interaction, supporting integrated dual-task protocols for ecological balance assessment and helping explain clinical discrepancies.

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Temporal and Spectral Neural Complexity Reveal Graded Auditory Awareness

Liardi, A.; Bor, D.; Rosas, F. E.; Mediano, P. A. M. E.

2026-04-21 neuroscience 10.64898/2026.04.20.719685 medRxiv
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Recent advances have shown that the complexity of neural signals tracks global states of consciousness, such as wakefulness versus sleep. However, it is still unclear to what extent neural complexity reflects fine-grained changes in conscious content within the same global state. Here, we investigate how the complexity of brain signals is affected by increased perceptual clarity of a stimulus. To this end, we estimated neural signal complexity using Complexity via State-space Entropy Rate (CSER) to EEG recordings from an auditory discrimination task. In this paradigm, auditory stimuli were presented at varying signal-to-noise ratios (SNRs), with higher SNRs corresponding to greater subjective audibility and perceptual clarity, enabling us to relate neural complexity to graded perceptual awareness within a constant global state of consciousness. Our results showed that, while broadband CSER remains constant across SNRs, its spectral decomposition displays frequency-specific effects, with higher SNRs associated with a decreased complexity in and {beta} bands, increased complexity in{delta} , and no significant changes in{gamma} . Additionally, a temporal investigation of CSER exhibited a significant increase in complexity with stimulus clarity, with deviations from baseline peaking approximately 30 ms before the ERP. Extending this analysis to pairs of brain regions, mutual information rate uncovered a sudden post-stimulus breakdown in long-range information transmission relative to baseline. Taken together, these results reveal that while aggregated complexity measures track global states of consciousness, time- and frequency-resolved information-theoretic measures can capture variations in perceptual awareness, demonstrating their sensitivity as estimators of the level of conscious experience.

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Temporal Dynamics of BOLD fMRI Predict Intracranially-Confirmed Seizure Onset Zones in Drug-Resistant Epilepsy

Nenning, K.-H.; Zengin, E.; Xu, T.; Freund, E.; Markowitz, N.; Johnson, S.; Bonelli, S. B.; Franco, A. R.; Colcombe, S. J.; Milham, M. P.; Mehta, A. D.; Bickel, S.

2026-04-20 neuroscience 10.64898/2026.04.15.718821 medRxiv
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ObjectiveIn individuals with drug-resistant epilepsy, accurately identifying the brain regions where seizures originate is a critical prerequisite to guide surgical treatment and achieve seizure freedom. To accomplish this, intracranial EEG is considered the gold standard, providing the spatiotemporal high-resolution data necessary to pinpoint epileptogenic activity. However, this precision is achieved through an invasive procedure with significant patient burden, which is fundamentally limited by the electrode placement and spatial coverage. MethodsIn this study, we investigated the potential utility of preoperative resting-state fMRI to non-invasively map alterations in brain dynamics at the whole brain level. Region-wise brain dynamics were quantified with complementary measures of local autocorrelation decay rates. We assessed the capacity of these derived features to effectively identify intracranial EEG confirmed seizure onset zones in 18 individuals with drug-resistant medial temporal lobe epilepsy. Overall, the study cohort contained 3867 implanted electrodes of which 159 classified as seizure onset zones by two independent board-certified epileptologists. ResultsOverall, our findings reveal more constrained temporal dynamics for brain regions associated with seizure onsets compared to non-seizure onset zones. Individual-level prediction showed a performance better than chance in 15 of the 18 patients. The overall predictive performance across all patients yielded a median AUC of 0.81, a median true positive rate of 0.75, and a median true negative rate of 0.83. Furthermore, in a subset of 13 patients, those with negative seizure outcomes showed higher probabilities of seizure onset zone predictions outside the resection area compared to those with good outcomes. SignificanceOverall, our findings suggest that altered temporal dynamics derived from preoperative resting-state fMRI represent a promising non-invasive approach for delineating epileptogenic tissue, potentially informing intervention strategies and guiding electrode placement.

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On the location of a "central retina" in mice

Günter, A.; Mühlfriedel, R.; Seeliger, M. W.

2026-04-21 neuroscience 10.64898/2026.04.16.718979 medRxiv
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The retinal topography of mammals reflects significant influences of the visual environment. In diurnal species, local specializations, such as the visual streak (VS) for panoramic vision and the area centralis or fovea for binocular vision, play a key role in optimizing visual perception and species viability. While the location of these sites is typically considered the retinal center, the definition of a "central retina" is less clear in nocturnal species. In mice, the most frequently used model in ophthalmologic research, the location of a central retina is hardly discernible in retinal images, neither in retinal structure (OCT sections) nor in vascular organization (SLO and angiography). In this study, we compare the murine retina with that of a diurnal rodent, the Mongolian gerbil (MG). We found that the S-opsin transitional zone (OTZ), a region characterized by the change from S-to M-opsin dominance along the dorsoventral opsin gradient in mice, has a similar relative position in the retina to the VS in the Mongolian gerbil, suggesting an evolutionary positional homology between these regions. Further, since the S-opsin-dominant region is optimized for visualizing the sky and the M-opsin-dominant region for visualizing the ground, the OTZ in between -much like the VS- naturally points toward the horizon. We therefore propose considering the OTZ as the position of a "central retinal area" in mice. Determining the anatomical-physiological center is particularly important to obtain meaningful relative measures such as averages across different retinal areas, as the common referencing to the optic nerve head (ONH) in mice does not take into account retinal organization and the eccentric position of the functional center.

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P2X7 receptor-mediated astrocytic atrophy in the hippocampus of mice after status epilepticus

Li, X.; Khan, M. T.; Vizi, E. S.; Sperlagh, B.; Lin, S.-S.; Verkhratsky, A.; Rubini, P.; Tang, Y.; Illes, P.

2026-04-20 neuroscience 10.64898/2026.04.16.718853 medRxiv
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Genetic deletion or pharmacological blockade of P2X7 receptors (Rs) counteract status epilepticus (SE) in animal models of epilepsy. It is, however, unclear whether P2X7Rs are localized at astrocytes or neurons, and the reason for astrocytic atrophy arising in consequence of SE is also ambiguous. We conducted a combined morphological/electrophysiological study in order to investigate these issues. It has been shown that kainic acid (KA)-induced SE in mice led to the atrophy of hippocampal astrocytes and at the same time to the decrease of ezrin immunoreactivity and its co-expression with mCherry, whose synthesis has been initiated by the injection of a virus complex. mCherry expression in astrocytes enabled us to study changes in cell somata and processes brought about by KA-injection. Ezrin is a plasmalemmal-cytoskeleton linker; its grade of expression indicates changes in the existence/function of small peripheral astrocytic processes. Pretreatment of mice with the blood-brain barrier-permeable P2X7R antagonist JNJ-47965567 prevented the SE-induced damage of astrocytes. KA caused a potentiation of dibenzoyl-ATP (Bz-ATP) currents in astrocytes but not neurons of the hippocampus. This effect was also abolished by pre-treatment of mice with JNJ-47965567 before applying KA, although no similar changes occurred in hippocampal CA1 neurons. The measurement of spontaneous postsynaptic currents (sPSCs) and spontaneous excitatory postsynaptic currents (sEPSCs) indicated a presynaptic facilitation of neurotransmitter release by Bz-ATP. In conclusion, we suggest that astrocytic P2X7Rs are the primary target of ATP release from damaged CNS cells in the hippocampus which simultaneously causes damage to astrocytic somata and processes.

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sEEGnal: an automated EEG preprocessing pipeline evaluated against expert-driven preprocessing

Ramirez-Torano, F.; Hatlestad-Hall, C.; Drews, A.; Renvall, H.; Rossini, P. M.; Marra, C.; Haraldsen, I. H.; Maestu, F.; Bruna, R.

2026-04-20 neurology 10.64898/2026.04.16.26351021 medRxiv
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Electroencephalography (EEG) preprocessing is a critical yet time-consuming step that often relies on expert-driven, semi-automatic pipelines, limiting scalability and reproducibility across large datasets. In this work, we present sEEGnal, a fully automated and modular pipeline for EEG preprocessing designed to produce outputs comparable to expert-driven analyses while ensuring consistency and computational efficiency. The pipeline integrates three main modules: data standardization following the EEG extension of the Brain Imaging Data Structure (BIDS), bad channel detection, and artifact identification, combining physiologically grounded criteria with independent component analysis and ICLabel-based classification. Performance was evaluated against manual preprocessing performed by EEG experts at two complementary levels: preprocessing metadata (bad channels, artifact duration, and rejected components) and EEG-derived measures. In addition, test-retest analyses were conducted to assess the stability of the pipeline across repeated recordings. Results show that sEEGnal achieves performance comparable to expert-driven preprocessing while preserving key neurophysiological features. Furthermore, the pipeline demonstrates reduced variability and increased consistency compared to human experts. These findings support sEEGnal as a robust and scalable solution for automated EEG preprocessing in both research and large-scale applications. HighlightsFully automated and modular EEG preprocessing pipeline. Benchmarked against expert-driven preprocessing. Comparable performance in metadata and EEG-derived measures. Demonstrates stable performance in test-retest recordings. BIDS-based framework for reproducible EEG data handling.

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Deep Learning-Based Detection of Focal Cortical Dysplasia in Children: External Validation of the MELD Graph and 3D-nnUNet pipelines

Dell'Orco, A.; De Vita, E.; D'Arco, F.; Lange, A.; Rüber, T.; Kaindl, A. M.; Wattjes, M. P.; Thomale, U. W.; Becker, L.-L.; Tietze, A.

2026-04-22 radiology and imaging 10.64898/2026.04.21.26351368 medRxiv
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Focal cortical dysplasias (FCDs) are one of the most common structural causes of drug-resistant epilepsy in children but are frequently subtle and difficult to detect on conventional MRI. Many automated lesion detection methods have therefore been proposed to support neuroradiological assessment. In this study, we externally validated two recently developed deep-learning approaches for FCD detection, MELD Graph and 3D-nnUNet, in a pediatric cohort. In this retrospective single-center study, brain MRI scans of 71 children evaluated for epilepsy were analyzed, including 35 MRI-positive patients with suspected FCD and 36 MRI-negative cases based on the primary radiology reports. Both models were applied to standard 3D T1-weighted and 3D FLAIR images. Detected lesions were reviewed by an experienced pediatric neuroradiologist and classified as true positive, false positive, or false negative. Clinical semiology and EEG findings were additionally evaluated for cases with false-positive detections. At the lesion level, MELD Graph achieved a precision of 0.85 and recall of 0.52, while 3D-nnUNet achieved a precision of 0.91 and recall of 0.48. In the MRI-negative patients, MELD Graph produced more false-positive detections than 3D-nnUNet (0.53 vs. 0.14 false-positive lesions per patient). At the patient level, MELD Graph showed slightly higher sensitivity than 3D-nnUNet (0.63 vs. 0.54), whereas 3D-nnUNet demonstrated markedly higher specificity (0.86 vs. 0.56). Improved FLAIR image quality was associated with trends toward improved model performance. Both models demonstrated high precision but moderate sensitivity, indicating that they are valuable decision-support tools but cannot replace expert neuroradiological evaluation. Optimized MRI acquisition protocols are needed to further improve automated lesion detection in pediatric epilepsy.

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High-resolution disconnectome predicts outcome and response to thrombectomy in basilar artery occlusion

Authamayou, B.; Marnat, G.; Matsulevits, A.; Munsch, F.; Lavielle, A.; Courbin, N.; Foulon, C.; Chen, B.; Micard, E.; Gory, B.; L'Allinec, V.; Bourcier, R.; Naggara, O.; Lauze, E.; Boulouis, G.; Lapergue, B.; Eker, O.; Sibon, I. P.; Thiebaut de Schotten, M.; Tourdias, T.

2026-04-21 radiology and imaging 10.64898/2026.04.20.26350998 medRxiv
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BackgroundAcute basilar artery occlusion (BAO) causes devastating strokes. Despite the benefit of endovascular treatment, the optimal management remains sometimes controversial, such as for patients with mild deficits, and would benefit from robust prognostic tools. Given the dense white matter networks within the posterior fossa, we tested whether quantifying disconnections from acute diffusion-weighted imaging (DWI) could improve outcome prediction and responders to recanalization compared with conventional metrics. MethodsWe conducted a secondary analysis from a prospective multicenter stroke registry, including consecutive patients (2017-2024) with BAO and admission MRI. Ultra-high-resolution diffusion MRI was acquired in healthy participants to build normative tractograms with optimized posterior fossa quality. Patient infarcts delineated on DWI were projected onto these tractograms to estimate disconnected fiber volume. The primary outcome was 90-day modified Rankin Scale (mRS) 0-3 vs 4-6. Predictive performance of disconnected fiber volume was compared with baseline NIHSS, infarct volume, and posterior circulation ASPECTS (pc-ASPECTS) using logistic regressions and areas under receiver operating characteristic curves (AUC). Ordinal regressions tested associations across the full mRS spectrum, stratified by recanalization status. Analyses were repeated in patients with NIHSS [&le;]10. ResultsAmong 201 patients (median age 70; NIHSS 10), 97 (48.3%) had poor outcome. Despite small median infarct volume (4.75 mL), disconnected fiber volume was substantial (median 25.15 mL). Disconnected fiber volume achieved an AUC of 0.84, outperforming NIHSS (0.67; p<0.0001), infarct volume (0.75; p=0.00059), and pc-ASPECTS (0.76; p=0.0127). Low disconnected fiber volume predicted better outcomes across the full mRS (OR=0.12 [95% CI, 0.065-0.204]) and greater benefit from successful recanalization (OR=0.33 [95% CI, 0.15-0.70]). In patients with NIHSS [&le;]10 (n=102), disconnected fiber volume remained the strongest predictor (AUC=0.83). ConclusionsDisconnected fiber volume derived indirectly is a robust prognostic marker of BAO outcomes that outperforms conventional predictors and may support future treatment decisions. Registrationhttps://clinicaltrials.gov - NCT03776877.

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Virtual reality exposes fine-scale alterations in behaviour following loss of the ADHD-linked gene adgrl3.1 in zebrafish

Reynolds, P.; Read, E.; Daly-East, C.; Parker, M. O.; Hindges, R.

2026-04-21 neuroscience 10.64898/2026.04.20.719162 medRxiv
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Zebrafish have been used a prominent model for high-throughput phenotypic screens of candidate risk gene mutations for several disorders. This also includes models for attention deficit/hyperactivity disorder (ADHD). Traditional behavioural tests, such as the forced light/dark assay, concentrate on basic locomotion measures. However, recently developed visually-driven locomotion assays, for example closed-loop systems using virtual reality, have allowed extraction of richer data on animal locomotion and decision-making under different sensory stimuli. Here, we have used such a system to assess the behaviour in adgrl3.1 mutant fish, an established model for ADHD. Our results show that mutants exhibit a higher baseline excitability and a lower threshold for initiating motor events, demonstrating that collecting behavioural responses in an interactive environment enables a more precise characterisation of ADHD-relevant phenotypes associated with adgrl3.1 disruption. More generally, we establish a scalable translational platform to screen gene-function relationships and possible therapeutic interventions, not only for ADHD but multiple neurodevelopmental disorders.